User's Guide

Here is a list of all topics with brief descriptions:

[detail level 1234567]

Installation
Error Handling
Error Codes
Old Error Handling
Error Handling Macros
Exceptions
mxlib Error Codes
Error Handling Files
Error Report Verbosity
Internal Error Reporting
General Mathematics
Constants and units
General Constants
Boost Constants	Constants provided by the boost library
Physical and Astronomical Constants
AO Constants
SOFA Constants
Dimensionless Constants
Constants with Dimensions
Unit Conversions	Definitions of unit coversions for physical constants
Geometry and Geodesy
Special Functions
The Airy Pattern
Bessel Functions
The Exponentially Modified Gaussian Distribution
The Gamma Function
The Gamma Distribution
The Gaussian Function
The Logistic Function
Machine Precision
The Moffat Function
The Weibull Distribution
Linear Algebra
Templatized BLAS and LAPACK
Templatized BLAS interface
Templatized Lapack interface
Eigen Lapack interfaces
NVIDIA Cuda cublas Interface
Getting ATLAS
Getting MKL
SVD Row and Column Deletion
Integration
Interpolation
Image Transforms
Data Fitting
Peak Fitting
Airy Patterns	Fitting Airy patterns to data
Exponetially Modified Gaussian Distribution	Fitting the Exponetially Modified Gaussian Distribution to data
Gamma Distribution	Fitting the Gamma Distribution to data
Gaussians	Fitting Gaussians to data
Moffat Functions	Fitting Moffat functions to data
Weibull Distribution	Fitting the Weibull Distribution to data
The levmar library
Plotting Data
Files
Random Numbers
Vector Utilities
Fourier Transforms	Methods for calculating the Fourier Transform
Fast Fourier Transforms	The Fast Fourier Transform interface
FFTW Interface	The Interface to the FFTW Library
Template FFTW	A Template Interface to FFTW
Types	Types and type specifications for FFTW Templates
Plan Specification	Plan specifications for FFTW Templates
Type Specification	Type specifications for FFTW Templates
Wisdom	Wrappers for working with fftw wisdom
Allocation	Wrappers for fftw memory allocation and de-allocation functions
Planning	Wrappers for working with fftw plans
Execution	Wrappers for executing with fftw plans
FFTW Environment	Management of FFTW Wisdom
The FFTW Library	Building and Installing FFTW
CUFFT Templates
Matrix Fourier Transforms	The Matrix Fouriter Transform interface
Fourier Transform Files
NVIDIA Cuda Interface
NVIDIA Cuda cublas Interface
CUFFT Templates
Mathematics Source Files
Mathematics Test Files
Fitting Files
Fourier Transform Files
Cuda Files
Signal Processing
Power Spectra
Autoregressive Power Spectra
PSD Filter	Filtering with a PSD to generate correlated noise
The Fourier Basis
The Zernike Basis
Window Functions
1-D Window Functions
2-D Window Functions
Image Filters
Filter With Kernels
Filter With Averaging
Radial Profiles
Noise Profiles
Signal Processing Files
Circular Buffer	A circular buffer class
Image Processing
Image Utilities
Image Padding
Image Masks
Image Transforms
Image Filters
Filter With Kernels
Filter With Averaging
Radial Profiles
Noise Profiles
Image Registration
Image Processing with Eigen
FITS Files
fitsFile typedefs
FITS Utilities
FITS Files Files
Image Processing Files
FITS Files Files
Wavefront Propagation
Point Spread Functions
The Airy Pattern
Coronagraphs
Adaptive Optics
Analysis of Adaptive Optics
AO Constants
Simulation of Adaptive Optics
Getting Started
Adaptive Optics Path Management
Adaptive Optics Files
Adaptive Optics Analysis Files
Adaptive Optics Simulation Files
Wavefront Propagation Files
Astronomy
Astrodynamics
Orbital Mechanics
The Kepler Problem
Positional Astronomy
Astronomical Photometry
Astronomical Spectra
Stars
Planets
Astronomy Files
The SOFA Library
General Utilities
Base Classes
Input/Output Utilities
Working with strings
File System Utilities
ASCII I/O Utilities
FITS Files
fitsFile typedefs
FITS Utilities
FITS Files Files
binVector Binary File Format	A simple binary file format for storing vectors of data on disk
Working with time
Putting a thread to sleep
Timespec comparisons
Meta-programming Utilities.
Multi-threading Utilities
System Programming
Interprocess Communication
Message Queues
Shared Memory
Application Framework
Application Files
Utility Files
Application Files
Testing
Building Tests
Coverage Report
Unit Tests
Adaptive Optics Unit Tests
Adaptive Optics Analysis Unit Tests
aoAtmosphere Unit Tests
aoPSDs Unit Tests
aoSystem Unit Tests
clAOLinearPredictor Unit Tests
clGainOpt Unit Tests
fourierTemporalPSD Unit Tests
aoConstants Unit Tests
aoWFS Unit Tests
fourierCovariance Unit Tests
jincFuncs Unit Tests
speckleAmpPSD Unit Tests
varmapToImage Unit Tests
wfsNoisePSD Unit Tests
zernikeCovariance Unit Tests
zernikeTemporalPSD Unit Tests
Adaptive Optics Simulation Unit Tests
pyramidSensor Unit Tests
ccdDetector Unit Tests
deformableMirror Unit Tests
directPhaseReconstructor Unit Tests
directPhaseReconstructorD Unit Tests
directPhaseReconstructorOrtho Unit Tests
directPhaseSensor Unit Tests
generalIntegrator Unit Tests
leakyIntegrator Unit Tests
pyramidSensorSepQuad Unit Tests
pywfsSlopeReconstructor Unit Tests
simulatedAOSystem Unit Tests
turbAtmosphere Unit Tests
turbLayer Unit Tests
turbSequence Unit Tests
turbSubHarmonic Unit Tests
AO Wavefront Unit Tests
wooferTweeterDM Unit Tests
wooferTweeterFilter Unit Tests
wooferTweeterReconstructor Unit Tests
aoPaths Unit Tests
AO Basis Unit Tests
fourierBasis Unit Tests
Influence Functions Unit Tests
AO Pupil Unit Tests
zernikeBasis Unit Tests
Application Framework Unit Tests
appConfigurator Unit Tests
application Unit Tests
clOptions Unit Tests
configTarget Unit Tests
INI Parser Unit Tests
iniFile Unit Tests
Astronomy Unit Tests
astroDynamics Unit Tests
astroSpectra Unit Tests
astroSpectrum Unit Tests
blackbody Unit Tests
Cahoy Albedo Unit Tests
Astronomy Constants Unit Tests
Keplerian Orbit Unit Tests
Orbit Utilities Unit Tests
phoenixSpectrum Unit Tests
Planet Properties Unit Tests
SOFA Wrapper Unit Tests
Stellar Properties Unit Tests
Astronomy Units Unit Tests
Base Utility Unit Tests
changeable Unit Tests
Error Handling Unit Tests
Error Reporting Unit Tests
error_t Utilities Unit Tests
Error Generator Tool Unit Tests
generate_cudaError_info Unit Tests
generate_errno_info Unit Tests
generate_error_t Unit Tests
generate_fits_status_info Unit Tests
Exception Unit Tests
Legacy Error API Unit Tests
Legacy Exception Unit Tests
Image Processing Unit Tests
eigenCube Unit Tests
Image Filters Unit Tests
Image Masks Unit Tests
Image Transforms Unit Tests
Image Utilities Unit Tests
Discrete Image Cross-Correlation Unit Tests
FFT Image Cross-Correlation Unit Tests
aperturePhotometer Unit Tests
circleOuterpix Unit Tests
eigenImage Unit Tests
Image Padding Unit Tests
Image Peak Interpolation Unit Tests
Image Cross-Correlation Unit Tests
imCenterCircleSym Unit Tests
imCenterRadon Unit Tests
Image Processing Umbrella Header Unit Tests
milkImage Unit Tests
sourceFinder Unit Tests
I/O Utilities Unit Tests
File Utilities Unit Tests
String Utilities Unit Tests
readColumns Unit Tests
FITS Unit Tests
fitsFile Unit Tests
fitsHeader Unit Tests
fitsHeaderCard Unit Tests
FITS Utilities Unit Tests
Binary Vector Unit Tests
I/O Utilities Umbrella Header Unit Tests
pout Unit Tests
Raw Binary I/O Unit Tests
Text Table Unit Tests
Interprocess Communication Unit Tests
IPC Umbrella Header Unit Tests
OpenMP Loop Watcher Unit Tests
Process Interface Unit Tests
Shared Memory Segment Unit Tests
Mathematics Unit Tests
Floating-Point Utilities Unit Tests
Geometry Unit Tests
Random Number Unit Tests
Templatized BLAS Unit Tests
Templatized LAPACK Unit Tests
Vector Utilities Unit Tests
SVD Row and Column Deletion Unit Tests
CUDA Unit Tests
Templatized cuBLAS Unit Tests
cublasHandle Unit Tests
cudaPtr Unit Tests
cusolverDnHandle Unit Tests
cusolverDnParams Unit Tests
syevdxT Unit Tests
templateCuda Unit Tests
templateCufft Unit Tests
templateCurand Unit Tests
Mathematical Fitting Unit Tests
array2FitGaussian1D Unit Tests
array2FitGaussian2D Unit Tests
fitAiry Unit Tests
fitEmpirical Unit Tests
fitExpModGaussian Unit Tests
fitGammaDistribution Unit Tests
fitGaussian Unit Tests
fitMoffat Unit Tests
fitWeibull Unit Tests
levmarInterface Unit Tests
templateLevmar Unit Tests
Fourier Transform Unit Tests
fftT Unit Tests
FFTW Environment Unit Tests
Fourier Transform Types Unit Tests
fftwTemplates Unit Tests
ft Unit Tests
ftUtils Unit Tests
mftT Unit Tests
Mathematical Function Unit Tests
Moffat Function Unit Tests
airyPattern Unit Tests
bessel Unit Tests
expModGaussian Unit Tests
factorial Unit Tests
gamma Unit Tests
gammaDistribution Unit Tests
gaussian Unit Tests
jinc Unit Tests
legendre Unit Tests
logistic Unit Tests
precision Unit Tests
sign Unit Tests
weibull Unit Tests
Mathematical Plotting Unit Tests
gnuPlot Unit Tests
Mathematical Constants Unit Tests
eigenLapack Unit Tests
gslInterpolation Unit Tests
gslInterpolator Unit Tests
histogramUniform Unit Tests
logInterpolator Unit Tests
logRadProfIntegrator Unit Tests
Mathematics Header Unit Tests
point2D Unit Tests
radprofIntegral Unit Tests
randomSeed Unit Tests
roots Unit Tests
Meta-programming Unit Tests
tagT Unit Tests
trueFalseT Unit Tests
typeDescription Unit Tests
typeTraits Unit Tests
Signal Processing Unit Tests
Circular Buffer Unit Tests
PSD Filter Unit Tests
PSD Utilities Unit Tests
Signal Window Unit Tests
Zernike Unit Tests
arpsd Unit Tests
autocorrelation Unit Tests
averagePeriodogram Unit Tests
basisUtils2D Unit Tests
crossCorrelation Unit Tests
fourierModes Unit Tests
gramSchmidt Unit Tests
levinsonRecursion Unit Tests
linearPredictor Unit Tests
psdFilterCuda Unit Tests
psdVarMean Unit Tests
Signal Processing Header Unit Tests
System Programming Unit Tests
Time Utilities Unit Tests
Environment Unit Tests
Git Repository Unit Tests
System Programming Umbrella Header Unit Tests
Wavefront Propagation Unit Tests
Fraunhofer Propagator Unit Tests
Imaging Utilities Unit Tests
idealCoronagraph Unit Tests
imagingArray Unit Tests
lyotCoronagraph Unit Tests
mxError Unit Tests
mxException Unit Tests
mxlib Umbrella Header Unit Tests
mxlib Coding Standards
mxlib Documentation Standards